-EPiC- NS group

publication

Journals　　　Books & Reviews　　Others

149.	高橋俊太郎, 杉本直己平成の化学キーワード　核酸の多様性を生みだすもう一つの塩基対相互作用　フーグスティーン塩基対化学（化学同人), 74, 24-25 2019.
148.	高橋俊太郎, 杉本直己分子夾雑系の生命化学（２）–遺伝子発現のデジタル挙動とアナログ挙動– 現代化学（化学同人), 575, 34-38 2019.
147.	H. Tateishi-Karimata, N. Sugimoto Biological and nanotechnological applications using interactions between ionic liquids and nucleic acids Biophysical Reviews (SpringerLink), 1-10 2018.
146.	S. Takahashi and N. Sugimoto Quantitative analysis of nucleic acid stability with ligands under high pressure to design novel drugs targeting G-quadruplexes Curr. Protoc. Nucleic. Acid Chem., 70, 17.9.1–17.9.17 2017.
145.	高橋俊太郎、杉本直己分子クラウディングワールド―クラウディングによる疾患や分子進化の化学的制御化学（化学同人）, 72, 12-17 2017.
144.	T. Endoh and N. Sugimoto Conformational Dynamics of mRNA in Gene Expression as New Pharmaceutical Target Chem. Rev., 17, 817-832 2017.
143.	S. Nakano and N. Sugimoto The structural stability and catalytic activity of DNA and RNA oligonucleotides in the presence of organic solvents Biophysical Reviews., 8, 11-23 2016.
142.	N. Sugimoto Regulation of transcription and translation by quadruplex structure of nucleic acids and its stabilizers Bull. Jpn. Soc. Coord. Chem., 65, 23-29 2015.
141.	S. Takahashi and N. Sugimoto Effect of molecular environment and high pressure on the thermodynamic stability of nucleic acid structures Rev. High Pres. Sci. Tech., 25, 116-125 2015.
140.	S. Nakano, D. Miyoshi, and N. Sugimoto Effects of molecular crowding on the structures, interactions, and functions of nucleic acids Chem. Rev., 12, 114 (5), 2733-2758 2014.
139.	N. Sugimoto Effect of ionic liquid and liposomes on the structure, stability, and function of nucleic acids Chemical Biology of Nucleic Acids: Fundamentals and Clinical Applications (Springer), Mar 28, 57-74 2014.
138.	杉本直己, 高橋俊太郎高圧下での核酸の挙動 CSJカレントレビュー極限環境の生命化学（化学同人）, 17, 110-118 2014.
137.	N. Sugimoto Noncanonical structures and their thermodynamics of DNA and RNA under molecular crowing: beyond the Watson-Crick double helix International Review of Cell and Molecular Biology (Elsevier), 307, chap 8, 205-273 2014.
136.	S. Takahashi and N. Sugimoto Effect of pressure on thermal stability of G-quadruplex DNA and double-stranded DNA structures Molecules, 18, 13297-13319 2013.
135.	H. Tateishi-Karimata, S. Nakano, and N. Sugimoto Quantitative analyses of nucleic acid stability under the molecular crowding condition induced by cosolutes Curr. Protoc. Nucleic Acid Chem., 7, Unit 7.19 2013.
134.	A. Okada, M. Taniguchi, D. Miyoshi, and N. Sugimoto Peptide-DNA hybrid G-quadruplex structures for regulation of protein expression depending on protease activity Peptides, 2013, 180 2013.
133.	D. Miyoshi, T. Fujimoto, and N. Sugimoto Chapter 5, Molecular crowding and hydration regulating of G-quadruplex formation Quadruplex Nucleic Acids (Springer), 330, 87-110 2013.
132.	H. Yaku, T. Murashima, D. Miyoshi, and N. Sugimoto Specific binding of anionic porphyrin and phthalocyanine to the G-quadruplex with a variety of in vitro and in vivo applications Molecules, 17, 10586-10613 2012.
131.	H. Yaku, T. Fujimoto, T. Murashima, D. Miyoshi, and N. Sugimoto Phthalocyanines: a new class of G-quadruplex-ligands with many potential applications Chem. Commun., 48, 6203-6216 2012 [Selected as a Front Cover].
130.	杉本直己, 三好大輔シグナル解析を目指した機能性核酸の構築細胞定量解析の最前線－ライフサーベイヤ構築に向けて－（シーエムシー出版）, 23-37 2012.
129.	遠藤玉樹, 杉本直己細胞内核酸化学ここまで進んだバイオセンシング・イメージング 1分子から細胞，脳まで, CSJカレントレビュー（化学同人）, 86-91 2012.
128.	長門石曉, 杉本直己新しい薬学辞典 A12 核酸医薬（朝倉書店）, 46-50 2012.
127.	M. Kuwahara and N. Sugimoto Chapter 8 Nucleic acid aptamers as molecular tags for omics analyses involving sequencing, DNA SEQUENCING, METHODS AND APPLICATIONS (InTech) 2012.
126.	S. Nagatoishi, D. Miyoshi, and N. Sugimoto Effects of protein binding on DNA G-quadruplex structures International Review of Biophysical Chemistry, 2, 129-134 2011.
125.	D. Miyoshi and N. Sugimoto G-quartet, G-quadruplex, and G-wire regulated by chemical stimuli DNA Nanotechnology (Methods in Molecular Biology series) (Springer), 749, 93-104 2011.
124.	遠藤玉樹, 杉本直己遺伝子制御を可能にするRNAの構造スイッチファルマシア（日本薬学会）, 47 (2), 146-150 2011.
123.	杉本直己ポストゲノム時代の生命化学と次世代スパコン化学（化学同人）, 4, 31-33 2011.
122.	杉本直己核酸化学の定量的基礎と仮説 CSJカレントレビュー　核酸化学のニュートレンド（化学同人日本化学会編）, 6, 10-17 2011.
121.	Y. Tanaka, K. Ishidate, K. Kishimoto, N. Sugimoto, and J. Kawakami Comparative thermodynamic analysis of RNA-protein interaction on surface and in solution Proc. 37th Intl. Symp. Nucleic Acids Chemistry, 276-277 2010.
120.	M. Kuwahara and N. Sugimoto Molecular evolution of functional nucleic acids with chemical modifications Molecules, 15, 5423-5444 2010.
119.	H. Yaku, T. Murashima, D. Miyoshi, and N. Sugimoto Roles of anionic functional groups in G-quadruplex-ligands for efficient telomerase inhibition Nucleic Acids Symp., Ser. (Oxf)., 54, 148-149 2010.
118.	J. Bhattacharyya, S. Maiti, S. Muhuri, D. Miyoshi, and N. Sugimoto Effect of LNA modification on the thermal stability of non-canonical DNA structures Nucleic Acids Symp., Ser. (Oxf)., 54, 172-173 2010.
117.	T. Fujimoto, D. Miyoshi, S. Nakano, and N. Sugimoto Unpaired region affecting hydration state of duplex Nucleic Acids Symp., Ser. (Oxf)., 54, 210-211 2010.
116.	中野修一,杉本直己化学ツールとしての分子クラウディングの活用化学フロンティア22　生命現象を理解する分子ツール (化学同人), 18章 2010.
115.	中野修一,杉本直己生体シグナル解析用の機能性核酸センサーの定量的デザインシングルセル解析の最前線 (シーエムシー出版), 9-16 2010.
114.	中野修一,杉本直己 DNAチップの基礎　ハイブリダイゼーションバイオチップ実用化ハンドブック (エヌ・ティー・エス), 13-19 2010.
113.	S. Nakano and N. Sugimoto Chapter 8, Energy of nucleic acid self-assemblies: From sequence to function through structure bottom-up nanofabrication:supramolecules Self-Assemblies and Organized Films (American Scientific Publishers), 3, 191-215 2009.
112.	S. Nakano, H. Hirayama, and N. Sugimoto Investigations of the cation binding to nucleotides by monitoring the hairpin-duplex equilibrium of a self-complementary sequence Nucleic Acids Symp., Ser., 53, 229-230 2009.
111.	D. Miyoshi, S. Muhuri, K. Mimura, and N. Sugimoto DNA junction structure stabilized by molecular crowding conditions Nucleic Acids Symp., Ser (Oxf), 53, 59-60 2009.
110.	T. Fujimoto, D. Miyoshi, H. Tateishi-Karimata, and N. Sugimoto Thermal stability and hydration state of DNA G-quadruplex regulated by loop regions Nucleic Acids Symp., Ser (Oxf), 53, 237-238 2009.
109.	N. Sugimoto Designable DNA functions toward new nanobiotechnology Bull. Chem. Soc. Jpn., 82, 1-10 2009.
108.	S. Fujii, K. Yagi, D. Miyoshi, H. Sakai, and N. Sugimoto Cu(Ⅱ) ion inhibits early stages of amyloid β fibril formation in vitro J. Biol. Inorg. Chem., 1, 118 2009.
107.	杉本直己, 三好大輔機能性核酸のテーラーメード設計超分子サイエンス＆テクノロジー（エヌ・ティー・エス）, 921-929 2009.
106.	三好大輔, 杉本直己セントラルドグマに学ぶセントラルドグマの制御方法核酸医薬の最前線 (シーエムシー出版), 1-13 2009.
105.	D. Miyoshi and N. Sugimoto Molecular crowding effects on structure and stability of DNA Biochimie, 90, 1040-1051 2008.
104.	S. Nakano, Y. Kitagawa, H. Tateishi-Karimata, and N. Sugimoto Molecular crowding effect on metal ion binding properties of the hammerhead ribozyme Nucleic Acids Symp., Ser., 52, 519-520 2008.
103.	D. Miyoshi, K. Nakamura, S. Muhuri, H. Tateishi-Karimata, and N. Sugimoto Thermodynamics of DNA structures under molecular crowding conditions with neutral and positive charged cosolutes Nucleic Acids Symp., Ser., 52, 413-414 2008.
102.	K. Koumoto, H. Ochiai, and N. Suigmoto Enhanced amplification of polymerase chain reaction by addition of cosolutes derived from a cellular compatible solute Nucleic Acids Symp., Ser., 52, 257-258 2008.
101.	T. Murashima, D. Sakiyama, D. Miyoshi, M. Kuriyama, T. Yamada, T. Miyazawa, and N. Sugimoto Cationic porphyrin induced a telomeric DNA to G-quadruplex form in water. Bioinorg Chem Appl., 294756 2008.
100.	K. Nakamura, H. Karimata, T. Ohmichi, D. Miyoshi, and N. Sugimoto Effects of cosolutes on the thermodynamic stability of parallel DNA duplex and triplex Nucleic Acids Symp., Ser., 51, 167-168 2007.
99.	H. Karimata, D. Miyoshi, T. Fujimoto, K. Koumoto, Z. M. Wang, and N. Sugimoto Conformational switch of a functional nanowire based on the DNA G-quadruplex Nucleic Acids Symp., Ser., 51, 251-252 2007.
98.	S. Nakano, K. Uenishi, M. Fujii, and N. Sugimoto The base-pairing ability of the base pair-mimic nucleosides Nucleic Acids Symp., Ser., 51, 71-72 2007.
97.	H. Oka, S. Nakano, Y. Uotani, K. Uenishi, M. Fujii, and N. Sugimoto Functionalization of DNA by the base pair-mimic nucleosides Nucleic Acids Symp., Ser., 51, 151-152 2007.
96.	杉本直己生命化学-Biochemistry- 丸善, 200ページ 2007.
95.	杉本直己, 大道達雄 2.7)リボザイム生物物理学ハンドブック（朝倉書店）, 126-129 2007.
94.	杉本直己, 松井淳核酸超分子と分子認識分子認識と超分子（三共出版）, 8章 139-156 2007.
93.	杉本直己, 甲元一也 5) 天然高分子核酸エネルギーデータに基づく核酸医薬の設計絵で見てわかるナノDDS 遺伝子医学MOOK別冊（メディカルドゥ）, 63-69 2007.
92.	赤松謙祐, 鶴岡孝章, 縄舟秀美, 杉本直己 Quantum Dot－量子ドット実験がうまくいく蛍光・発光試薬の選び方と使い方（羊土社）, 164-170 2007.
91.	J. Matsui, Y. Kamitaka, J. Nagano, Y. Ono, S. Komai, D. Miyoshi, K. Tamaki, and N. Sugimoto Molecularly imprinting within a single peptide molecule for synthesizing a water –soluble ATP receptor. Proceedings of the International Conference of 43rd Japanese Peptide Symposium and 4 th Peptide Engineering Meeting, 396-397 2006.
90.	M. Inoue, D. Miyoshi, and N. Sugimoto Development of molecular logic gates using the structural switch of telomere DNAs Nucleic Acids Symp., Ser., 50, 315-316 2006.
89.	J. Kawakami, C. Maiya, and N. Sugimoto Functional role of the cofactor on activation process of L-histidine dependent ribozyme Nucleic Acids Symp., Ser., 50, 241-242 2006.
88.	H. Q. Yu, D. Miyoshi, and N. Sugimoto Properties of long telomeric DNAs under cell-mimicking conditions Nucleic Acids Symp., Ser., 50, 207-208 2006.
87.	N. Sugimoto The effect of structure of cosolutes on the DNA duplex formation Nucleic Acids Symp., Ser., 50, 205-206 2006.
86.	D. Miyoshi, H. Karimata, and N. Sugimoto Factors regulating thermodynamics stability of DNA structures under molecular crowding conditions Nucleic Acids Symp., Ser., 50, 203-204 2006.
85.	N. Sugimoto Recognition of the base pair-mimic nucleosides by DNA polymerases Nucleic Acids Symp., Ser., 50, 201-202 2006.
84.	H. Karimata, S. Nakano, and N. Sugimoto The roles of cosolutes on the hammerhead ribozyme activity Nucleic Acids Symp., Ser., 50, 81-82 2006.
83.	杉本直己, 三好大輔シグナル解析を目指した機能性核酸の構築－細胞定量解析の最前線－ライフサーベイヤ構築に向けて－(シーエムシー出版), 23-37 2006.
82.	杉本直己, 中野修一, 大道達雄デザイナブル核酸修飾ウィルスを用いない遺伝子法の材料、技術、方法論の新たな展開、遺伝子医学MOOK5 (メディカルドゥ), 245-251 2006.
81.	D. Miyoshi and N. Sugimoto Use of the polymorphic nature of high-order DNA structures for the design of dynamic and functional nanodevices Recent Devel, Nucleic Acids Res. (Transworld Research Network), 2, 49-70 2006.
80.	J. Kawakami, H. Tokitoh, Y. Tanabe, and N. Sugimoto Specific recognition of the basic N peptide by an RNA Nucleic Acids Res. Symp., Ser., 49, 353-354 2005.
79.	M. Inoue, D. Miyoshi, and N. Sugimoto Structural switch of telomere DNA by pH and monovalent cation Nucleic Acids Res. Symp., Ser., 49, 243-244 2005.
78.	T. Kirihata, S. Nakano, S. Fujii, M. Natsumoto, M. Kuwahara, H. Sawai, and N. Sugimoto Conformational switch of oligonucleotides induced by spermine Nucleic Acids Res. Symp., Ser., 49, 241-242 2005.
77.	H. Karimata, D. Miyoshi, and N. Sugimoto Structure and stability of DNA quadruplexes under molecular crowding conditions Nucleic Acids Res. Symp., Ser., 49, 239-240 2005.
76.	D. Miyoshi, Z.M. Wang, H. Karimata, and N. Sugimoto DNA nanowire sensitive to the surrounding condition Nucleic Acids Res. Symp., Ser., 49, 43-44 2005.
75.	S. Nakano, Y. Uotani, Y. Anno, M. Fujii, and N. Sugimoto Conformational change of a nucleotide by a base-pair mimic nucleoside in the complementary DNA strand Nucleic Acids Res. Symp., Ser., 48, 259-260 2004.
74.	J. Kawakami, C. Maiya, and N. Sugimoto Analysis of the secondary structure of a ribozyme that requires his as a cofactor Nucleic Acids Res. Symp., Ser., 48, 203-204 2004.
73.	T. Kirihata, S. Nakano, and N. Sugimoto Secondary structure change of oligonucleotide induced by salts Nucleic Acids Res. Symp., Ser., 48, 109-110 2004.
72.	H. Karimata, S. Nakano, T. Ohmichi, J. Kawasaki, and N. Sugimoto Stabilization of a DNA duplex under molecular crowding conditions of PEG Nucleic Acids Symp., Ser., 48, 107-108 2004.
71.	杉本直己, 村嶋貴之フォトバイオエンジニアリング化学フロンティア13，ナノバイオエンジニアリング（化学同人）, 9章, 95-107 2004.
70.	杉本直己細胞ナノエンジニアリング化学フロンティア13，ナノバイオエンジニアリング (化学同人）, 16章, 95-107 2004.
69.	T. Ohmichi, A. Takashima, and N. Sugimoto A nano-circular single-stranded DNA works as a novel tool for cell-free peputide synthesis and detection of SNPs Biomolecular chemistry, Proc. ISBC 2003, 34-35 2003.
68.	S. Nakano, Y. Uotani, and N. Sugimoto An oligopeptide containing the C-terminal sequence of RNase A inhibits RNA hydrolysis by RNase A Biomolecular chemistry, Proc. ISBC 2003, 240-241 2003.
67.	S. Nakano and N. Sugimoto Important effects of non-Watson-Crick interactions and cation binding on nucleic acid structures Recent research development in nucleosides & nucleotides (Transworld Research Network), 1, 59-80 2003.
66.	T. Ohmichi, A. Takashima, and N. Sugimoto A novel approach of cell-free peptide synthesis and SNPs detection using non-circular single-stranded DNA Nucleic Acids Res. Suppl., 3, 311-312 2003.
65.	N. Sugimoto Beyond the Watson-Crick double helix: design of functional nucleic acids in silico, in tube, and in cell Nucleic Acids Res. Suppl., 3, 211-212 2003.
64.	Y. Uotani, S. Nakano, S. Nakashima, Y. Anno, M. Fujii, and N. Sugimoto Large stacking stability of a base pair-mimic nucleotide on the DNA duplex Nucleic Acids Res. Suppl., 3, 79-80 2003.
63.	Y. Okumoto, H. Fujiki, J. Kawakami, S. Nakashima, S. Nakano, T. Ohmichi, D. Miyoshi, and N. Sugimoto Novel biomaterials derived from deoxyribozyme and NAPzyme Macromol. Chem. Pys. Macromol. Symp., 201, 245-252 2003.
62.	N. Sugimoto Polysaccharide-polynucleotide complexes part17. Solvent effects on conformational-transition of polydeoxyad enylic acid in the complex with schizophyllan Polym. J., 35, 714-720 2003.
61.	杉本直己生命分子間認識を解明するには、ラショナル法でいくべきかランダム法でいくべきか？　それが問題だ先端化学シリーズⅢ　糖鎖／バイオマテリアル／分子認識／バイオインフォマティクス（丸善） Ⅱ章, 11, 121-129 2003.
60.	T. Kanzaki, S. Nakano, and N. Sugimoto Role of 2’-OH on thermodynamic stability and structure of chimeric oligonucleotides Nucleic Acids Res. Supple., 2, 189-190 2002.
59.	T. Ohmichi, H. Karimata, and N. Sugimoto Effect of secondary structure of short double-stranded RNA on RNAi efficiency Nucleic Acids Res. Supple., 2, 63-64 2002.
58.	H. Kanno, M. Dezawa, H. Yamada, Y. Tanaka, N. Tajima, T. Mimura, H. Murata, S. Shimazu, S. Nakano, N. Sugimoto, and I. Yamamoto Role of VHL tumor suppressorgene in neural differentiation of neural stem cells on normoxic and hypoxic conditions First Meeting of the Asian Society for Neuro-Oncology, 39 2002.
57.	杉本直己遺伝子化学（化学同人） , 204ページ 2002.
56.	杉本直己, 安田恭子２５章　生命分子と表面プラズモン効果化学フロンティア5　生命化学のニューセントラルドグマ　テーラーメイド・バイオケミストリーのめざすもの（化学同人）, 256-262 2002.
55.	杉本直己, 三好大輔１０章　タンパク質の構造・機能化学化学フロンティア5　生命化学のニューセントラルドグマ　テーラーメイド・バイオケミストリーのめざすもの（化学同人）, 104-117 2002.
54.	杉本直己, 大道達雄５章　機能性核酸化学フロンティア5　生命化学のニューセントラルドグマ　テーラーメイド・バイオケミストリーのめざすもの（化学同人）, 54-62 2002.
53.	杉本直己, 中野修一２章　核酸の相互作用化学フロンティア5　生命化学のニューセントラルドグマ　テーラーメイド・バイオケミストリーのめざすもの（化学同人）, 24-34 2002.
52.	N. Sugimoto and I. Yasumatsu A new concept for the design of antisense oligonucleotides based on nucleic acid thermostability Curr. Med. Chem.-Anti-Cancer Agents, 1, 95-112 2001.
51.	D. Miyoshi, A. Nakao, and N. Sugimoto Structural transition of d(G4T4G4) from antiparallel to parallel G-quartet induced by divalent cations Nucleic Acids Res. Supple., 1, 259-260 2001.
50.	P. Wu, H. Hara, Y. Kawamoto, and N. Sugimoto Effect of cytosine protonation and cation on thermodynamic properties of parallel DNA triplex family Nucleic Acids Res. Supple., 1, 39-40 2001.
49.	T. Ohmichi, M. Nakamura, and N. Sugimoto Development of ribozyme synthesis system using a rolling-synchronization: Effect of template DNA secondary structure on recognition of RNA polymerase Nucleic Acids Res. Supple., 1, 37-38 2001.
48.	杉本直己, 三好大輔, Peng Wu ゲノム化学とSNPs解析　化学の果たす役割別冊化学, ヒトゲノム最前線21世紀は遺伝子の時代（化学同人）, 31-57 2001.
47.	J. Kawakami and N. Sugimoto Stability prediction of nucleic acid duplexes and its application for antisense DNA/RNA technology (2) Antisense, 4, 71-82 2000.
46.	J. Kawakami and N. Sugimoto Stability prediction of nucleic acid duplexes and its application for antisense DNA/RNA technology (1) Antisense, 4, 3-16 2000.
45.	Y. Okumoto and N. Sugimoto Development of a novel functional biosensor with a short Ca2+-dependent deoxyribozyme Nucleic Acids Symp. Ser., 44, 79-80 2000.
44.	P. Wu and N. Sugimoto New thermodynamic characterization and transition mechanism of DNA duplex formation Nucleic Acids Symp. Ser., 44, 15-16 2000.
43.	杉本直己遺伝子とバイオテクノロジー（丸善）, 164ページ 1999.
42.	J. Kawakami and N.Sugimoto In vitro evolution Journal of Japan Society for Fuzzy Theory and Systems, 11, 779 1999.
41.	N. Sugimoto and Y. Okumoto Development of a short Ca2+-dependent deoxyribozyme with RNA cleavage activity Nucleic Acids Symp. Ser., 42, 281-282 1999.
40.	N. Sugimoto, S. Okabe, and M. Yoneyama Combinatorial approach to development of peptides that recognize DNA tetraloops Nucleic Acids Symp. Ser., 42, 179-180 1999.
39.	N. Sugimoto, K. Yamamoto, and N. Satoh Positional effect of single bulge nucleotide on PNA (peptide nucleic acid)/DNA hybrid stability Nucleic Acids Symp. Ser., 42, 95-96 1999.
38.	N. Sugimoto, N. Satoh, and K. Yamamoto Comparison of thermodynamic stabilities between PNA (peptide nucleic acid)/DNA hybrid duplexes and DNA/DNA duplexes Nucleic Acids Symp. Ser., 42, 93-94 1999.
37.	N. Sugimoto and S. Nakano Effect of cation concentration on duplex stability of nucleic acids with unnatural base pairs Nucleic Acids Symp. Ser., 39, 121-122 1998.
36.	J. Kawakami, K. Tsujita, and N. Sugimoto Stability of DNA duplexes containing mirror-image DNA Nucleic Acids Symp. Ser., 39, 55-56 1998.
35.	N. Sugimoto and T. Ohmichi Effect of nucleotide sequence and metal ions at the active site on a short ribozyme activation Nucleic Acids Symp. Ser., 37, 299-300 1997.
34.	J. Kawakami and N. Sugimoto Evolution of a phosphorothioate RNA library during in vitro selection Nucleic Acids Symp. Ser., 37, 201-202 1997.
33.	N. Sugimoto, I. Yasumatsu, and M. Fujimoto Stabilities of internal rU-dG and rG-dT pairs in RNA/DNA hybrids Nucleic Acids Symp. Ser., 37, 199-200 1997.
32.	N. Sugimoto, S. Nakano, and M. Fujimoto Experimental quantitation of cation effect on nucleic acid stability Nucleic Acids Symp. Ser., 37, 147-148 1997.
31.	N. Sugimoto and S. Nakano A24 mer peptie with activity of a nucleic acid discrimination and its recombination First International Peptide Symp., P-108 1997.
30.	N. Sugimoto and S. Nakano DNA recognition mechanism of a 24 mer oligopeptide derived from RecA protein First Peptide Engineering Meeting, P2-2 1997.
29.	N. Sugimoto and S. Nakano Development of new SPR chip with an oligopeptide recognizing a single-stranded DNA Nucleic Acids Symp. Ser., 35, 303-304 1996.
28.	N. Sugimoto and N. Wakizaka Effect of metal ions on DNA ligation catalyzed by a deoxyribozyme Nucleic Acids Symp. Ser., 35, 191-192 1996.
27.	N. Sugimoto and T. Ohmichi The role of different metal ions on the cleavage of a substrate RNA catalyzed by a small chimeric ribozyme Nucleic Acids Symp. Ser., 35, 189-190 1996.
26.	N. Sugimoto, I. Yasumatsu, Y. Shoji, W. Iwatani, N. Tamura, J. Shimada, and Y. Mizushima Relationship between antiviral effect of antisense oligonucleotides against HSV-1 mRNA precursor and stability of the RNA/DNA complexes Nucleic Acids Symp. Ser., 35, 175-176 1996.
25.	杉本直己バイオテクノロジー－新しいタイプの酵素ＲＮＡ酵素（リボザイム）化学便覧応用化学編（丸善）, 2版 9章, 5-46 1996.
24.	N. Sugimoto Thermdynamics of RNA/DNA hybrid formation Tracing Biological Evolution in Protain and Gene Structures (Elsevier Science), 209-229 1995.
23.	N. Sugimoto, S. Nakano, M. Yoneyama, H. Nakamuta, T. Ohmichi, and M. Sasaki Thermodynamic stability of RNA/DNA hybrids J. Biomolec. Struct. Dynam., 12, a233 1995.
22.	T. Ohmichi, M. Sasaki, and N. Sugimoto Regulation of leadzyme (lead-dependent ribozyme) reaction by amino acids and rare earth ions Nucleic Acids Symp. Ser., 34, 227-228 1995.
21.	T. Tanaka, Y. Kurihara, T. Sakamoto, M. Furusawa, A. Kobayashi, M. Katahira, K. Takeuchi, N. Sugimoto, and S. Uesugi Structure of translation initiation region of c-myc mRNA and thermostability of the c-myc mRNA/antisense ODN complex Nucleic Acids Symp. Ser., 34, 135-136 1995.
20.	H. Ide, H. Ikeda, K. Makino, M. Sasaki, and N. Sugimoto Structure and stability of DNA containing a-deoxyadenosine Nucleic Acids Symp. Ser., 34, 81-82 1995.
19.	S. Nakano, M. Sasaki, and N. Sugimoto Interaction of oligonucleotides with a single stranded DNA binding site of RecA protein Nucleic Acids Symp. Ser., 34, 61-62 1995.
18.	N. Sugimoto Thermodynamics of secondary structure formation of nucleic acids consisting of RNA and DNA Proc. 20th Taniguchi Symp., Biophysics Dibision, 209-229 1994.
17.	N. Sugimoto, S. Nakano, M. Katoh, A. Matsumura, H. Nakamuta, T. Ohmichi, M. Yoneyama, and M. Sasaki Thermodynamic parameters to predict the stability of RNA/DNA hybrids in antisense interaction First International Antisense Conference of Japan, P1-05 1994.
16.	N. Sugimoto, H. Nakamuta, and M. Sasaki Dynamic behaviors of DNA double helix containing a bulged nucleotide Nucleic Acids Symp. Ser., 31, 301-302 1994.
15.	N. Sugimoto, T. Ohmichi, A. Tanaka, A. Matsumura, and M. Sasaki Stability of the TAR RNA and its complex with arginine Nucleic Acids Symp. Ser., 29, 167-168 1993.
14.	H. Satake, S. Takeda, A. Matsumura, M. Sasaki, N. Sugimoto, and Y. Wataya Action of 5-trifluoromethyl-2’-deoxyuridine on DNA synthesis Nucleic Acids Symp. Ser., 27, 189-190 1992.
13.	N. Sugimoto, A. Matsumura, M. Katoh, and M. Sasaki Double-helix formation of self-complementary chimeric oligonucleotides r(CG)n d(CG)3-n (n=0, 1, 2, 3) Nucleic Acids Symp. Ser., 27, 139-140 1992.
12.	N. Sugimoto, K. Honda, and M. Sasaki Kinetics and thermodynamics of double-helix, formation of self-complementary deoxyribooctanucleotides d(TCTATAGA) and d(TAGATCTA) Nucleic Acids Symp. Ser., 27, 129-130 1992.
11.	T. Shimayama, S. Sawata, M. Komiyama, Y. Takagi, Y. Tanaka, A. Wada, N. Sugimoto, J. J. Rossi, F. Nishikawa, S. Nishikawa, and K. Taira Substitution of non-catalytic stem and loop regions of hammerhead ribozyme with DNA counterparts only increases KM without sacrificing the catalytic step (kcat): a way to improve substrate-specificity Nucleic Acids Symp. Ser., 27, 17-18 1992.
10.	N. Sugimoto, Y. Shintani, and M. Sasaki Effect of the third-strand length on the formation of DNA triple helix Nucleic Acids Symp. Ser., 25, 183-184 1991.
9.	N. Sugimoto, A. Matsumura, K. Hasegawa, and M. Sasaki Effect on dangling ends on the stability of a DNA double helix Nucleic Acids Symp. Ser., 25, 51-52 1991.
8.	N. Sugimoto, A. Matsumura, and M. Sasaki Stability of an oligonucleotide helix containing a terminal fluorescent nucleotide Book of Abstract: 7th Conver. Biomol. Stereodynam., a219 1991.
7.	D. H. Turner, N. Sugimoto, and S.M. Freier Thermodynamics and Kinetics of Base-Pairing and DNA and RNA Self-Assembly and Helix-Coil Transition Nucleic Acids (W.Saenger Ed. Springer-Verlag), Chap.3. 6, 201-227 1990.
6.	N. Sugimoto, K. Hasegawa, and M. Sasaki Stability of 3’ dangling ends on the core helix of AUGCAU at various Na+ concentrations Nucleic Acids Symp. Ser., 22, 107-108 1990.
5.	N. Sugimoto, N. Monden, M. Sasaki, S. Yamakage, and H. Takaku Thermodynamics and kinetics for the helix formation of the P3 region in Tetrahymena ribozyme Nucleic Acids Symp. Ser., 22, 45-46 1990.
4.	N. Sugimoto, M. Sasaki, R. Kierzek, and D. H. Turner Mg2+ effects on a circle opening reaction of the self-splicing intervening sequence from Tetrahymena thermophila Nucleic Acids Symp. Ser., 21, 117-118 1989.
3.	N. Sugimoto, K. Hasegawa, N. Monden, and M. Sasaki Electrostatic interaction in the reaction between porphyrin and DNA Nucleic Acids Symp. Ser., 21, 7-8 1989.
2.	D. H.Turner, N. Sugimoto, and S.M. Freier RNA Structure Prediction Annual Review of Biophysics and Biophysical Chemistry, 17, 167-192 1988.
1.	D. H. Turner, S. M. Freier, N. Sugimoto, D. R. Hickey, J. A. Jaeger, A. Sinclair, D. Alkema, T. Neilson, M. H. Caruthers, and R. Kierzek Improved parameters for prediction of RNA secondary structure and insights into why RNA forms double helixes Structure and Dynamics of RNA (P. H. Van Kinppenberg and C. W. Hibers Eds.), Plenum Press, NY, pp1-13 1986.